WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57C7.4.1 Sequence Name  F57C7.4.1
Length (nt)  4661   Chromosome Location  X: 10580996-10589565
Chromosome . Primary Identifier  X Chromosome Location . Start  10580996
Chromosome Location . End  10589565 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57C7.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010200 F57C7.4 F57C7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57C7.4 F57C7.4 4563   X: 10581067-10581104

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F57C7.4.1 10580996 10589565 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249482   109   X: 10580996-10581104 Caenorhabditis elegans
Exon249483   100   X: 10581421-10581520 Caenorhabditis elegans
Exon249484   119   X: 10581570-10581688 Caenorhabditis elegans
Exon249485   103   X: 10581732-10581834 Caenorhabditis elegans
Exon249486   86   X: 10581882-10581967 Caenorhabditis elegans
Exon249487   168   X: 10582012-10582179 Caenorhabditis elegans
Exon249488   182   X: 10582462-10582643 Caenorhabditis elegans
Exon249489   147   X: 10582697-10582843 Caenorhabditis elegans
Exon249490   122   X: 10582887-10583008 Caenorhabditis elegans
Exon249491   111   X: 10583271-10583381 Caenorhabditis elegans
Exon249492   300   X: 10583432-10583731 Caenorhabditis elegans
Exon249493   144   X: 10583779-10583922 Caenorhabditis elegans
Exon249494   211   X: 10583976-10584186 Caenorhabditis elegans
Exon249495   307   X: 10584232-10584538 Caenorhabditis elegans
Exon249496   199   X: 10585144-10585342 Caenorhabditis elegans
Exon249497   133   X: 10585394-10585526 Caenorhabditis elegans
Exon249498   183   X: 10585568-10585750 Caenorhabditis elegans
Exon249499   235   X: 10585792-10586026 Caenorhabditis elegans
Exon249500   148   X: 10586071-10586218 Caenorhabditis elegans
Exon249501   156   X: 10586451-10586606 Caenorhabditis elegans
Exon249502   98   X: 10586652-10586749 Caenorhabditis elegans
Exon249503   121   X: 10586796-10586916 Caenorhabditis elegans
Exon249504   68   X: 10586959-10587026 Caenorhabditis elegans
Exon249505   130   X: 10587073-10587202 Caenorhabditis elegans
Exon249506   134   X: 10587252-10587385 Caenorhabditis elegans
Exon249507   158   X: 10587433-10587590 Caenorhabditis elegans
Exon249508   62   X: 10587636-10587697 Caenorhabditis elegans
Exon249509   165   X: 10587744-10587908 Caenorhabditis elegans
Exon249510   165   X: 10589043-10589207 Caenorhabditis elegans
Exon249511   297   X: 10589269-10589565 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F57C7.4.1 10580996 10589565 -1

1 Sequence

Length
4661

1 Sequence Ontology Term

Identifier Name Description
transcript