WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00202050 Gene Name  M79.15
Sequence Name  ? M79.15 Organism  Caenorhabditis elegans
Automated Description  Is affected by met-2 based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 75
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00202050

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M79.15 M79.15 75   X: 10624823-10624897
 

Other

0 CDSs

0 RNAi Result

2 Allele

Public Name
gk964260
gk962707

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00202050 10624823 10624897 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_10624898..10626517   1620 X: 10624898-10626517 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in met-2(n4256) L1 animals comparing to in N2 control. DeSeq2 (v.2.11.40.2), p < 0.05. WBPaper00060886:met-2(n4256)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00202050 10624823 10624897 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
75

1 Sequence Ontology Term