WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:M79.2.1 Sequence Name  M79.2.1
Length (nt)  1415   Chromosome Location  X: 10626518-10628807
Chromosome . Primary Identifier  X Chromosome Location . Start  10626518
Chromosome Location . End  10628807 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M79.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010902 M79.2 M79.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M79.2 M79.2 1326   X: 10626605-10626788

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M79.2.1 10626518 10628807 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249660   271   X: 10626518-10626788 Caenorhabditis elegans
Exon249661   118   X: 10626841-10626958 Caenorhabditis elegans
Exon249662   107   X: 10627007-10627113 Caenorhabditis elegans
Exon249663   223   X: 10627431-10627653 Caenorhabditis elegans
Exon249664   232   X: 10627702-10627933 Caenorhabditis elegans
Exon249665   88   X: 10627987-10628074 Caenorhabditis elegans
Exon249666   122   X: 10628276-10628397 Caenorhabditis elegans
Exon249667   54   X: 10628452-10628505 Caenorhabditis elegans
Exon249668   112   X: 10628559-10628670 Caenorhabditis elegans
Exon249669   88   X: 10628720-10628807 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M79.2.1 10626518 10628807 -1

1 Sequence

Length
1415

1 Sequence Ontology Term

Identifier Name Description
transcript