WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11A1.3e.4 Sequence Name  F11A1.3e.4
Length (nt)  3592   Chromosome Location  X: 10647057-10666875
Chromosome . Primary Identifier  X Chromosome Location . Start  10647057
Chromosome Location . End  10666875 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11A1.3e.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000908 daf-12 F11A1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11A1.3e F11A1.3e 2037   X: 10660802-10660868

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F11A1.3e.4 10647057 10666875 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249706   155   X: 10647057-10647211 Caenorhabditis elegans
Exon249718   73   X: 10660796-10660868 Caenorhabditis elegans
Exon249729   83   X: 10661303-10661385 Caenorhabditis elegans
Exon249738   123   X: 10661433-10661555 Caenorhabditis elegans
Exon249747   267   X: 10661601-10661867 Caenorhabditis elegans
Exon249756   48   X: 10661934-10661981 Caenorhabditis elegans
Exon249765   72   X: 10662030-10662101 Caenorhabditis elegans
Exon249774   96   X: 10662795-10662890 Caenorhabditis elegans
Exon249783   75   X: 10663250-10663324 Caenorhabditis elegans
Exon249792   98   X: 10663660-10663757 Caenorhabditis elegans
Exon249798   107   X: 10663807-10663913 Caenorhabditis elegans
Exon249807   197   X: 10663962-10664158 Caenorhabditis elegans
Exon249816   180   X: 10664406-10664585 Caenorhabditis elegans
Exon249827   293   X: 10664630-10664922 Caenorhabditis elegans
Exon249837   162   X: 10664970-10665131 Caenorhabditis elegans
Exon249847   76   X: 10665178-10665253 Caenorhabditis elegans
Exon249859   1487   X: 10665389-10666875 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F11A1.3e.4 10647057 10666875 1

1 Sequence

Length
3592

1 Sequence Ontology Term

Identifier Name Description
transcript