WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E01A2.2b.3 Sequence Name  E01A2.2b.3
Length (nt)  2364   Chromosome Location  I: 4132498-4135239
Chromosome . Primary Identifier  I Chromosome Location . Start  4132498
Chromosome Location . End  4135239 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01A2.2b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017085 srrt-1 E01A2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E01A2.2b E01A2.2b 1590   I: 4133315-4133327

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E01A2.2b.3 4132498 4135239 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9013   71   I: 4132498-4132568 Caenorhabditis elegans
Exon9017   369   I: 4132624-4132992 Caenorhabditis elegans
Exon9022   170   I: 4133158-4133327 Caenorhabditis elegans
Exon9027   1108   I: 4133383-4134490 Caenorhabditis elegans
Exon9032   311   I: 4134547-4134857 Caenorhabditis elegans
Exon9037   335   I: 4134905-4135239 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E01A2.2b.3 4132498 4135239 1

1 Sequence

Length
2364

1 Sequence Ontology Term

Identifier Name Description
transcript