WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13E6.2.1 Sequence Name  F13E6.2.1
Length (nt)  2392   Chromosome Location  X: 10668162-10674299
Chromosome . Primary Identifier  X Chromosome Location . Start  10668162
Chromosome Location . End  10674299 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13E6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008746 F13E6.2 F13E6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13E6.2 F13E6.2 2190   X: 10668280-10668353

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13E6.2.1 10668162 10674299 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249836   192   X: 10668162-10668353 Caenorhabditis elegans
Exon249837   76   X: 10668401-10668476 Caenorhabditis elegans
Exon249838   98   X: 10668711-10668808 Caenorhabditis elegans
Exon249839   94   X: 10668852-10668945 Caenorhabditis elegans
Exon249840   117   X: 10669202-10669318 Caenorhabditis elegans
Exon249841   116   X: 10669366-10669481 Caenorhabditis elegans
Exon249842   57   X: 10669525-10669581 Caenorhabditis elegans
Exon249843   126   X: 10669858-10669983 Caenorhabditis elegans
Exon249844   63   X: 10670248-10670310 Caenorhabditis elegans
Exon249845   139   X: 10670361-10670499 Caenorhabditis elegans
Exon249846   237   X: 10671064-10671300 Caenorhabditis elegans
Exon249847   171   X: 10671342-10671512 Caenorhabditis elegans
Exon249848   131   X: 10671581-10671711 Caenorhabditis elegans
Exon249849   165   X: 10671760-10671924 Caenorhabditis elegans
Exon249850   79   X: 10671971-10672049 Caenorhabditis elegans
Exon249851   115   X: 10672217-10672331 Caenorhabditis elegans
Exon249852   139   X: 10672486-10672624 Caenorhabditis elegans
Exon249853   130   X: 10673114-10673243 Caenorhabditis elegans
Exon249854   147   X: 10674153-10674299 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13E6.2.1 10668162 10674299 -1

1 Sequence

Length
2392

1 Sequence Ontology Term

Identifier Name Description
transcript