WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18E3.7c.1 Sequence Name  C18E3.7c.1
Length (nt)  2855   Chromosome Location  I: 4186547-4189935
Chromosome . Primary Identifier  I Chromosome Location . Start  4186547
Chromosome Location . End  4189935 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18E3.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004093 ppw-1 C18E3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18E3.7c C18E3.7c 2664   I: 4186562-4186712

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18E3.7c.1 4186547 4189935 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9171   166   I: 4186547-4186712 Caenorhabditis elegans
Exon9181   254   I: 4186770-4187023 Caenorhabditis elegans
Exon9188   200   I: 4187166-4187365 Caenorhabditis elegans
Exon9196   60   I: 4187412-4187471 Caenorhabditis elegans
Exon9205   119   I: 4187520-4187638 Caenorhabditis elegans
Exon9214   443   I: 4187695-4188137 Caenorhabditis elegans
Exon9223   287   I: 4188186-4188472 Caenorhabditis elegans
Exon9231   397   I: 4188518-4188914 Caenorhabditis elegans
Exon9240   656   I: 4188961-4189616 Caenorhabditis elegans
Exon9251   273   I: 4189663-4189935 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18E3.7c.1 4186547 4189935 1

1 Sequence

Length
2855

1 Sequence Ontology Term

Identifier Name Description
transcript