WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07A4.3.1 Sequence Name  R07A4.3.1
Length (nt)  1062   Chromosome Location  X: 10753703-10758152
Chromosome . Primary Identifier  X Chromosome Location . Start  10753703
Chromosome Location . End  10758152 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07A4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011074 R07A4.3 R07A4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07A4.3 R07A4.3 765   X: 10754917-10755003

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07A4.3.1 10753703 10758152 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249992   126   X: 10753703-10753828 Caenorhabditis elegans
Exon249999   99   X: 10754905-10755003 Caenorhabditis elegans
Exon250000   70   X: 10755056-10755125 Caenorhabditis elegans
Exon250002   267   X: 10755174-10755440 Caenorhabditis elegans
Exon250004   78   X: 10756099-10756176 Caenorhabditis elegans
Exon250006   183   X: 10756224-10756406 Caenorhabditis elegans
Exon250012   239   X: 10757914-10758152 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07A4.3.1 10753703 10758152 1

1 Sequence

Length
1062

1 Sequence Ontology Term

Identifier Name Description
transcript