WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05A10.1c.1 Sequence Name  T05A10.1c.1
Length (nt)  7397   Chromosome Location  X: 10769282-10782973
Chromosome . Primary Identifier  X Chromosome Location . Start  10769282
Chromosome Location . End  10782973 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A10.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004862 sma-9 T05A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05A10.1c T05A10.1c 5079   X: 10775285-10775344

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T05A10.1c.1 10769282 10782973 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249988   120   X: 10769282-10769401 Caenorhabditis elegans
Exon250003   525   X: 10773130-10773654 Caenorhabditis elegans
Exon250007   156   X: 10773707-10773862 Caenorhabditis elegans
Exon250021   538   X: 10773931-10774468 Caenorhabditis elegans
Exon250034   452   X: 10774893-10775344 Caenorhabditis elegans
Exon250047   76   X: 10775530-10775605 Caenorhabditis elegans
Exon250060   410   X: 10775830-10776239 Caenorhabditis elegans
Exon250074   138   X: 10776288-10776425 Caenorhabditis elegans
Exon250089   219   X: 10776573-10776791 Caenorhabditis elegans
Exon250103   1523   X: 10776840-10778362 Caenorhabditis elegans
Exon250118   105   X: 10778436-10778540 Caenorhabditis elegans
Exon250133   121   X: 10778743-10778863 Caenorhabditis elegans
Exon250148   98   X: 10778910-10779007 Caenorhabditis elegans
Exon250163   116   X: 10779061-10779176 Caenorhabditis elegans
Exon250178   109   X: 10779262-10779370 Caenorhabditis elegans
Exon250193   221   X: 10779422-10779642 Caenorhabditis elegans
Exon250208   158   X: 10779689-10779846 Caenorhabditis elegans
Exon250223   276   X: 10779896-10780171 Caenorhabditis elegans
Exon250238   149   X: 10780228-10780376 Caenorhabditis elegans
Exon250253   143   X: 10780465-10780607 Caenorhabditis elegans
Exon250278   464   X: 10780896-10781359 Caenorhabditis elegans
Exon250291   101   X: 10781498-10781598 Caenorhabditis elegans
Exon250303   244   X: 10781646-10781889 Caenorhabditis elegans
Exon250315   142   X: 10781940-10782081 Caenorhabditis elegans
Exon250328   137   X: 10782133-10782269 Caenorhabditis elegans
Exon250352   656   X: 10782318-10782973 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T05A10.1c.1 10769282 10782973 1

1 Sequence

Length
7397

1 Sequence Ontology Term

Identifier Name Description
transcript