WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43E11.6a.2 Sequence Name  C43E11.6a.2
Length (nt)  2575   Chromosome Location  I: 4229888-4236042
Chromosome . Primary Identifier  I Chromosome Location . Start  4229888
Chromosome Location . End  4236042 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43E11.6a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003516 nab-1 C43E11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43E11.6a C43E11.6a 2166   I: 4229915-4230007

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43E11.6a.2 4229888 4236042 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9328   120   I: 4229888-4230007 Caenorhabditis elegans
Exon9330   96   I: 4230764-4230859 Caenorhabditis elegans
Exon9339   83   I: 4231143-4231225 Caenorhabditis elegans
Exon9344   189   I: 4231574-4231762 Caenorhabditis elegans
Exon9350   208   I: 4232496-4232703 Caenorhabditis elegans
Exon9357   163   I: 4233072-4233234 Caenorhabditis elegans
Exon9367   207   I: 4233481-4233687 Caenorhabditis elegans
Exon9377   638   I: 4233886-4234523 Caenorhabditis elegans
Exon9387   348   I: 4234713-4235060 Caenorhabditis elegans
Exon9402   523   I: 4235520-4236042 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43E11.6a.2 4229888 4236042 1

1 Sequence

Length
2575

1 Sequence Ontology Term

Identifier Name Description
transcript