WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05A10.1a Sequence Name  T05A10.1a
Length (nt)  6201   Chromosome Location  X: 10773091-10773654
Chromosome . Primary Identifier  X Chromosome Location . Start  10773091
Chromosome Location . End  10773654
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A10.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36395 SMA-9, isoform a 231.1 2066 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00081748
WBRNAi00000664
WBRNAi00052431
WBRNAi00018170
WBRNAi00113602
WBRNAi00062961
WBRNAi00062962
WBRNAi00062963
WBRNAi00107523
WBRNAi00082715
WBRNAi00082717
WBRNAi00082716
WBRNAi00097944
WBRNAi00097931
WBRNAi00097943
WBRNAi00097942
WBRNAi00097945
WBRNAi00107154
WBRNAi00107105
WBRNAi00107610
WBRNAi00107512

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05A10.1a 10773091 10773654 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004862 sma-9 T05A10.1 Caenorhabditis elegans

23 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05A10.1a 10773091 10773654 1
CDS:T05A10.1a 10773707 10773862 1
CDS:T05A10.1a 10773931 10774468 1
CDS:T05A10.1a 10775830 10776239 1
CDS:T05A10.1a 10776288 10776425 1
CDS:T05A10.1a 10776573 10776791 1
CDS:T05A10.1a 10776840 10778362 1
CDS:T05A10.1a 10778436 10778540 1
CDS:T05A10.1a 10778743 10778863 1
CDS:T05A10.1a 10778910 10779007 1
CDS:T05A10.1a 10779061 10779176 1
CDS:T05A10.1a 10779262 10779370 1
CDS:T05A10.1a 10779422 10779642 1
CDS:T05A10.1a 10779689 10779846 1
CDS:T05A10.1a 10779896 10780171 1
CDS:T05A10.1a 10780228 10780376 1
CDS:T05A10.1a 10780465 10780607 1
CDS:T05A10.1a 10780896 10781359 1
CDS:T05A10.1a 10781498 10781598 1
CDS:T05A10.1a 10781646 10781889 1
CDS:T05A10.1a 10781940 10782081 1
CDS:T05A10.1a 10782133 10782269 1
CDS:T05A10.1a 10782318 10782386 1

1 Sequence

Length
6201

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05A10.1a.1 T05A10.1a.1 6788   X: 10773091-10782973