WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31B12.1c.1 Sequence Name  F31B12.1c.1
Length (nt)  5901   Chromosome Location  X: 10794857-10812534
Chromosome . Primary Identifier  X Chromosome Location . Start  10794857
Chromosome Location . End  10812534 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31B12.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004036 plc-1 F31B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1c F31B12.1c 5688   X: 10795070-10795207

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1c.1 10794857 10812534 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250406   351   X: 10794857-10795207 Caenorhabditis elegans
Exon250420   146   X: 10796510-10796655 Caenorhabditis elegans
Exon250423   94   X: 10796984-10797077 Caenorhabditis elegans
Exon250435   128   X: 10797180-10797307 Caenorhabditis elegans
Exon250446   187   X: 10797362-10797548 Caenorhabditis elegans
Exon250459   87   X: 10798203-10798289 Caenorhabditis elegans
Exon250471   237   X: 10798408-10798644 Caenorhabditis elegans
Exon250483   97   X: 10798695-10798791 Caenorhabditis elegans
Exon250495   332   X: 10799045-10799376 Caenorhabditis elegans
Exon250507   273   X: 10799425-10799697 Caenorhabditis elegans
Exon250519   300   X: 10800071-10800370 Caenorhabditis elegans
Exon250531   153   X: 10800415-10800567 Caenorhabditis elegans
Exon250543   226   X: 10800615-10800840 Caenorhabditis elegans
Exon250556   106   X: 10801155-10801260 Caenorhabditis elegans
Exon250568   238   X: 10801305-10801542 Caenorhabditis elegans
Exon250580   111   X: 10801623-10801733 Caenorhabditis elegans
Exon250592   228   X: 10802923-10803150 Caenorhabditis elegans
Exon250606   121   X: 10805636-10805756 Caenorhabditis elegans
Exon250618   94   X: 10806193-10806286 Caenorhabditis elegans
Exon250630   140   X: 10806335-10806474 Caenorhabditis elegans
Exon250642   214   X: 10806633-10806846 Caenorhabditis elegans
Exon250654   266   X: 10807000-10807265 Caenorhabditis elegans
Exon250666   79   X: 10807494-10807572 Caenorhabditis elegans
Exon250679   139   X: 10807964-10808102 Caenorhabditis elegans
Exon250690   150   X: 10808152-10808301 Caenorhabditis elegans
Exon250702   183   X: 10808350-10808532 Caenorhabditis elegans
Exon250714   236   X: 10808656-10808891 Caenorhabditis elegans
Exon250726   126   X: 10809062-10809187 Caenorhabditis elegans
Exon250738   292   X: 10809232-10809523 Caenorhabditis elegans
Exon250750   210   X: 10809644-10809853 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1c.1 10794857 10812534 -1

1 Sequence

Length
5901

1 Sequence Ontology Term

Identifier Name Description
transcript