WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31B12.1c.1 Sequence Name  F31B12.1c.1
Length (nt)  5901   Chromosome Location  X: 10794857-10812534
Chromosome . Primary Identifier  X Chromosome Location . Start  10794857
Chromosome Location . End  10812534 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31B12.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004036 plc-1 F31B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1c F31B12.1c 5688   X: 10795070-10795207

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1c.1 10794857 10812534 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250433   351   X: 10794857-10795207 Caenorhabditis elegans
Exon250447   146   X: 10796510-10796655 Caenorhabditis elegans
Exon250450   94   X: 10796984-10797077 Caenorhabditis elegans
Exon250462   128   X: 10797180-10797307 Caenorhabditis elegans
Exon250473   187   X: 10797362-10797548 Caenorhabditis elegans
Exon250486   87   X: 10798203-10798289 Caenorhabditis elegans
Exon250498   237   X: 10798408-10798644 Caenorhabditis elegans
Exon250510   97   X: 10798695-10798791 Caenorhabditis elegans
Exon250522   332   X: 10799045-10799376 Caenorhabditis elegans
Exon250534   273   X: 10799425-10799697 Caenorhabditis elegans
Exon250546   300   X: 10800071-10800370 Caenorhabditis elegans
Exon250558   153   X: 10800415-10800567 Caenorhabditis elegans
Exon250570   226   X: 10800615-10800840 Caenorhabditis elegans
Exon250583   106   X: 10801155-10801260 Caenorhabditis elegans
Exon250595   238   X: 10801305-10801542 Caenorhabditis elegans
Exon250607   111   X: 10801623-10801733 Caenorhabditis elegans
Exon250619   228   X: 10802923-10803150 Caenorhabditis elegans
Exon250633   121   X: 10805636-10805756 Caenorhabditis elegans
Exon250645   94   X: 10806193-10806286 Caenorhabditis elegans
Exon250657   140   X: 10806335-10806474 Caenorhabditis elegans
Exon250669   214   X: 10806633-10806846 Caenorhabditis elegans
Exon250681   266   X: 10807000-10807265 Caenorhabditis elegans
Exon250693   79   X: 10807494-10807572 Caenorhabditis elegans
Exon250706   139   X: 10807964-10808102 Caenorhabditis elegans
Exon250717   150   X: 10808152-10808301 Caenorhabditis elegans
Exon250729   183   X: 10808350-10808532 Caenorhabditis elegans
Exon250741   236   X: 10808656-10808891 Caenorhabditis elegans
Exon250753   126   X: 10809062-10809187 Caenorhabditis elegans
Exon250765   292   X: 10809232-10809523 Caenorhabditis elegans
Exon250777   210   X: 10809644-10809853 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1c.1 10794857 10812534 -1

1 Sequence

Length
5901

1 Sequence Ontology Term

Identifier Name Description
transcript