WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31B12.1a.1 Sequence Name  F31B12.1a.1
Length (nt)  5938   Chromosome Location  X: 10795747-10812572
Chromosome . Primary Identifier  X Chromosome Location . Start  10795747
Chromosome Location . End  10812572 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31B12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004036 plc-1 F31B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1a F31B12.1a 5697   X: 10795950-10796051

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1a.1 10795747 10812572 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250408   305   X: 10795747-10796051 Caenorhabditis elegans
Exon250419   146   X: 10796510-10796655 Caenorhabditis elegans
Exon250421   139   X: 10796939-10797077 Caenorhabditis elegans
Exon250433   128   X: 10797180-10797307 Caenorhabditis elegans
Exon250445   187   X: 10797362-10797548 Caenorhabditis elegans
Exon250457   87   X: 10798203-10798289 Caenorhabditis elegans
Exon250469   237   X: 10798408-10798644 Caenorhabditis elegans
Exon250481   97   X: 10798695-10798791 Caenorhabditis elegans
Exon250493   332   X: 10799045-10799376 Caenorhabditis elegans
Exon250505   273   X: 10799425-10799697 Caenorhabditis elegans
Exon250517   300   X: 10800071-10800370 Caenorhabditis elegans
Exon250529   153   X: 10800415-10800567 Caenorhabditis elegans
Exon250541   226   X: 10800615-10800840 Caenorhabditis elegans
Exon250554   106   X: 10801155-10801260 Caenorhabditis elegans
Exon250566   238   X: 10801305-10801542 Caenorhabditis elegans
Exon250578   111   X: 10801623-10801733 Caenorhabditis elegans
Exon250590   228   X: 10802923-10803150 Caenorhabditis elegans
Exon250604   121   X: 10805636-10805756 Caenorhabditis elegans
Exon250616   94   X: 10806193-10806286 Caenorhabditis elegans
Exon250628   140   X: 10806335-10806474 Caenorhabditis elegans
Exon250640   214   X: 10806633-10806846 Caenorhabditis elegans
Exon250652   266   X: 10807000-10807265 Caenorhabditis elegans
Exon250664   79   X: 10807494-10807572 Caenorhabditis elegans
Exon250677   139   X: 10807964-10808102 Caenorhabditis elegans
Exon250688   150   X: 10808152-10808301 Caenorhabditis elegans
Exon250700   183   X: 10808350-10808532 Caenorhabditis elegans
Exon250712   236   X: 10808656-10808891 Caenorhabditis elegans
Exon250724   126   X: 10809062-10809187 Caenorhabditis elegans
Exon250736   292   X: 10809232-10809523 Caenorhabditis elegans
Exon250748   210   X: 10809644-10809853 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1a.1 10795747 10812572 -1

1 Sequence

Length
5938

1 Sequence Ontology Term

Identifier Name Description
transcript