WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31B12.1g.1 Sequence Name  F31B12.1g.1
Length (nt)  10485   Chromosome Location  X: 10796447-10838650
Chromosome . Primary Identifier  X Chromosome Location . Start  10796447
Chromosome Location . End  10838650 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31B12.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004036 plc-1 F31B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1g F31B12.1g 10485   X: 10796447-10796655

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1g.1 10796447 10838650 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

64 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250440   209   X: 10796447-10796655 Caenorhabditis elegans
Exon250454   94   X: 10796984-10797077 Caenorhabditis elegans
Exon250466   128   X: 10797180-10797307 Caenorhabditis elegans
Exon250478   181   X: 10797368-10797548 Caenorhabditis elegans
Exon250490   87   X: 10798203-10798289 Caenorhabditis elegans
Exon250502   237   X: 10798408-10798644 Caenorhabditis elegans
Exon250514   97   X: 10798695-10798791 Caenorhabditis elegans
Exon250526   332   X: 10799045-10799376 Caenorhabditis elegans
Exon250538   273   X: 10799425-10799697 Caenorhabditis elegans
Exon250550   300   X: 10800071-10800370 Caenorhabditis elegans
Exon250562   153   X: 10800415-10800567 Caenorhabditis elegans
Exon250574   226   X: 10800615-10800840 Caenorhabditis elegans
Exon250587   106   X: 10801155-10801260 Caenorhabditis elegans
Exon250599   238   X: 10801305-10801542 Caenorhabditis elegans
Exon250611   111   X: 10801623-10801733 Caenorhabditis elegans
Exon250623   228   X: 10802923-10803150 Caenorhabditis elegans
Exon250637   121   X: 10805636-10805756 Caenorhabditis elegans
Exon250649   94   X: 10806193-10806286 Caenorhabditis elegans
Exon250661   140   X: 10806335-10806474 Caenorhabditis elegans
Exon250673   214   X: 10806633-10806846 Caenorhabditis elegans
Exon250685   266   X: 10807000-10807265 Caenorhabditis elegans
Exon250697   79   X: 10807494-10807572 Caenorhabditis elegans
Exon250709   139   X: 10807964-10808102 Caenorhabditis elegans
Exon250721   150   X: 10808152-10808301 Caenorhabditis elegans
Exon250733   183   X: 10808350-10808532 Caenorhabditis elegans
Exon250745   236   X: 10808656-10808891 Caenorhabditis elegans
Exon250757   126   X: 10809062-10809187 Caenorhabditis elegans
Exon250769   292   X: 10809232-10809523 Caenorhabditis elegans
Exon250781   210   X: 10809644-10809853 Caenorhabditis elegans
Exon250793   281   X: 10809914-10810194 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1g.1 10796447 10838650 -1

1 Sequence

Length
10485

1 Sequence Ontology Term

Identifier Name Description
transcript