WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31B12.1h.1 Sequence Name  F31B12.1h.1
Length (nt)  10515   Chromosome Location  X: 10796447-10838650
Chromosome . Primary Identifier  X Chromosome Location . Start  10796447
Chromosome Location . End  10838650 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31B12.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004036 plc-1 F31B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1h F31B12.1h 10515   X: 10796447-10796655

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1h.1 10796447 10838650 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

64 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250414   209   X: 10796447-10796655 Caenorhabditis elegans
Exon250428   94   X: 10796984-10797077 Caenorhabditis elegans
Exon250440   128   X: 10797180-10797307 Caenorhabditis elegans
Exon250452   181   X: 10797368-10797548 Caenorhabditis elegans
Exon250464   87   X: 10798203-10798289 Caenorhabditis elegans
Exon250476   237   X: 10798408-10798644 Caenorhabditis elegans
Exon250488   97   X: 10798695-10798791 Caenorhabditis elegans
Exon250500   332   X: 10799045-10799376 Caenorhabditis elegans
Exon250512   273   X: 10799425-10799697 Caenorhabditis elegans
Exon250524   300   X: 10800071-10800370 Caenorhabditis elegans
Exon250536   153   X: 10800415-10800567 Caenorhabditis elegans
Exon250548   226   X: 10800615-10800840 Caenorhabditis elegans
Exon250561   106   X: 10801155-10801260 Caenorhabditis elegans
Exon250573   238   X: 10801305-10801542 Caenorhabditis elegans
Exon250585   111   X: 10801623-10801733 Caenorhabditis elegans
Exon250597   228   X: 10802923-10803150 Caenorhabditis elegans
Exon250611   121   X: 10805636-10805756 Caenorhabditis elegans
Exon250623   94   X: 10806193-10806286 Caenorhabditis elegans
Exon250635   140   X: 10806335-10806474 Caenorhabditis elegans
Exon250647   214   X: 10806633-10806846 Caenorhabditis elegans
Exon250659   266   X: 10807000-10807265 Caenorhabditis elegans
Exon250671   79   X: 10807494-10807572 Caenorhabditis elegans
Exon250683   139   X: 10807964-10808102 Caenorhabditis elegans
Exon250695   150   X: 10808152-10808301 Caenorhabditis elegans
Exon250707   183   X: 10808350-10808532 Caenorhabditis elegans
Exon250719   236   X: 10808656-10808891 Caenorhabditis elegans
Exon250731   126   X: 10809062-10809187 Caenorhabditis elegans
Exon250743   292   X: 10809232-10809523 Caenorhabditis elegans
Exon250755   210   X: 10809644-10809853 Caenorhabditis elegans
Exon250767   281   X: 10809914-10810194 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1h.1 10796447 10838650 -1

1 Sequence

Length
10515

1 Sequence Ontology Term

Identifier Name Description
transcript