WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31B12.1i.1 Sequence Name  F31B12.1i.1
Length (nt)  10635   Chromosome Location  X: 10796447-10838650
Chromosome . Primary Identifier  X Chromosome Location . Start  10796447
Chromosome Location . End  10838650 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31B12.1i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004036 plc-1 F31B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1i F31B12.1i 10635   X: 10796447-10796655

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1i.1 10796447 10838650 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

65 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250442   209   X: 10796447-10796655 Caenorhabditis elegans
Exon250456   94   X: 10796984-10797077 Caenorhabditis elegans
Exon250468   128   X: 10797180-10797307 Caenorhabditis elegans
Exon250480   181   X: 10797368-10797548 Caenorhabditis elegans
Exon250492   87   X: 10798203-10798289 Caenorhabditis elegans
Exon250504   237   X: 10798408-10798644 Caenorhabditis elegans
Exon250516   97   X: 10798695-10798791 Caenorhabditis elegans
Exon250528   332   X: 10799045-10799376 Caenorhabditis elegans
Exon250540   273   X: 10799425-10799697 Caenorhabditis elegans
Exon250552   300   X: 10800071-10800370 Caenorhabditis elegans
Exon250564   153   X: 10800415-10800567 Caenorhabditis elegans
Exon250576   226   X: 10800615-10800840 Caenorhabditis elegans
Exon250589   106   X: 10801155-10801260 Caenorhabditis elegans
Exon250601   238   X: 10801305-10801542 Caenorhabditis elegans
Exon250613   111   X: 10801623-10801733 Caenorhabditis elegans
Exon250625   228   X: 10802923-10803150 Caenorhabditis elegans
Exon250639   121   X: 10805636-10805756 Caenorhabditis elegans
Exon250651   94   X: 10806193-10806286 Caenorhabditis elegans
Exon250663   140   X: 10806335-10806474 Caenorhabditis elegans
Exon250675   214   X: 10806633-10806846 Caenorhabditis elegans
Exon250687   266   X: 10807000-10807265 Caenorhabditis elegans
Exon250699   79   X: 10807494-10807572 Caenorhabditis elegans
Exon250711   139   X: 10807964-10808102 Caenorhabditis elegans
Exon250723   150   X: 10808152-10808301 Caenorhabditis elegans
Exon250735   183   X: 10808350-10808532 Caenorhabditis elegans
Exon250747   236   X: 10808656-10808891 Caenorhabditis elegans
Exon250759   126   X: 10809062-10809187 Caenorhabditis elegans
Exon250771   292   X: 10809232-10809523 Caenorhabditis elegans
Exon250783   210   X: 10809644-10809853 Caenorhabditis elegans
Exon250795   281   X: 10809914-10810194 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1i.1 10796447 10838650 -1

1 Sequence

Length
10635

1 Sequence Ontology Term

Identifier Name Description
transcript