WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31B12.1k.1 Sequence Name  F31B12.1k.1
Length (nt)  10665   Chromosome Location  X: 10796447-10838650
Chromosome . Primary Identifier  X Chromosome Location . Start  10796447
Chromosome Location . End  10838650 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31B12.1k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004036 plc-1 F31B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31B12.1k F31B12.1k 10665   X: 10796447-10796655

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1k.1 10796447 10838650 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

65 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250417   209   X: 10796447-10796655 Caenorhabditis elegans
Exon250431   94   X: 10796984-10797077 Caenorhabditis elegans
Exon250443   128   X: 10797180-10797307 Caenorhabditis elegans
Exon250455   181   X: 10797368-10797548 Caenorhabditis elegans
Exon250467   87   X: 10798203-10798289 Caenorhabditis elegans
Exon250479   237   X: 10798408-10798644 Caenorhabditis elegans
Exon250491   97   X: 10798695-10798791 Caenorhabditis elegans
Exon250503   332   X: 10799045-10799376 Caenorhabditis elegans
Exon250515   273   X: 10799425-10799697 Caenorhabditis elegans
Exon250527   300   X: 10800071-10800370 Caenorhabditis elegans
Exon250539   153   X: 10800415-10800567 Caenorhabditis elegans
Exon250551   226   X: 10800615-10800840 Caenorhabditis elegans
Exon250564   106   X: 10801155-10801260 Caenorhabditis elegans
Exon250576   238   X: 10801305-10801542 Caenorhabditis elegans
Exon250588   111   X: 10801623-10801733 Caenorhabditis elegans
Exon250600   228   X: 10802923-10803150 Caenorhabditis elegans
Exon250614   121   X: 10805636-10805756 Caenorhabditis elegans
Exon250626   94   X: 10806193-10806286 Caenorhabditis elegans
Exon250638   140   X: 10806335-10806474 Caenorhabditis elegans
Exon250650   214   X: 10806633-10806846 Caenorhabditis elegans
Exon250662   266   X: 10807000-10807265 Caenorhabditis elegans
Exon250674   79   X: 10807494-10807572 Caenorhabditis elegans
Exon250686   139   X: 10807964-10808102 Caenorhabditis elegans
Exon250698   150   X: 10808152-10808301 Caenorhabditis elegans
Exon250710   183   X: 10808350-10808532 Caenorhabditis elegans
Exon250722   236   X: 10808656-10808891 Caenorhabditis elegans
Exon250734   126   X: 10809062-10809187 Caenorhabditis elegans
Exon250746   292   X: 10809232-10809523 Caenorhabditis elegans
Exon250758   210   X: 10809644-10809853 Caenorhabditis elegans
Exon250770   281   X: 10809914-10810194 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F31B12.1k.1 10796447 10838650 -1

1 Sequence

Length
10665

1 Sequence Ontology Term

Identifier Name Description
transcript