WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01A4.1c Sequence Name  T01A4.1c
Length (nt)  3831   Chromosome Location  I: 4491732-4492596
Chromosome . Primary Identifier  I Chromosome Location . Start  4491732
Chromosome Location . End  4492596
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01A4.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33583 GCY-28, isoform c 145.0 1276 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00052063
WBRNAi00034986

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01A4.1c 4491732 4492596 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020131 gcy-28 T01A4.1 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01A4.1c 4491732 4492596 1
CDS:T01A4.1c 4498008 4498122 1
CDS:T01A4.1c 4499008 4499209 1
CDS:T01A4.1c 4499693 4499920 1
CDS:T01A4.1c 4500472 4500591 1
CDS:T01A4.1c 4500650 4500922 1
CDS:T01A4.1c 4501784 4501822 1
CDS:T01A4.1c 4502570 4502899 1
CDS:T01A4.1c 4503270 4503469 1
CDS:T01A4.1c 4504425 4504569 1
CDS:T01A4.1c 4504638 4504809 1
CDS:T01A4.1c 4505062 4505217 1
CDS:T01A4.1c 4505722 4506038 1
CDS:T01A4.1c 4506668 4506905 1
CDS:T01A4.1c 4507152 4507310 1
CDS:T01A4.1c 4507484 4507582 1
CDS:T01A4.1c 4508035 4508207 1

1 Sequence

Length
3831

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01A4.1c.1 T01A4.1c.1 4596   I: 4491700-4508940