WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y119C1B.8a.1 Sequence Name  Y119C1B.8a.1
Length (nt)  2987   Chromosome Location  I: 4525970-4534798
Chromosome . Primary Identifier  I Chromosome Location . Start  4525970
Chromosome Location . End  4534798 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y119C1B.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022473 bet-1 Y119C1B.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y119C1B.8a Y119C1B.8a 2562   I: 4526395-4526490

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y119C1B.8a.1 4525970 4534798 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10075   521   I: 4525970-4526490 Caenorhabditis elegans
Exon10078   45   I: 4526551-4526595 Caenorhabditis elegans
Exon10090   63   I: 4526650-4526712 Caenorhabditis elegans
Exon10094   146   I: 4527742-4527887 Caenorhabditis elegans
Exon10102   183   I: 4528953-4529135 Caenorhabditis elegans
Exon10110   132   I: 4529872-4530003 Caenorhabditis elegans
Exon10118   217   I: 4530060-4530276 Caenorhabditis elegans
Exon10126   186   I: 4530591-4530776 Caenorhabditis elegans
Exon10134   657   I: 4531353-4532009 Caenorhabditis elegans
Exon10142   189   I: 4532577-4532765 Caenorhabditis elegans
Exon10150   324   I: 4533542-4533865 Caenorhabditis elegans
Exon10158   96   I: 4533920-4534015 Caenorhabditis elegans
Exon10166   171   I: 4534487-4534657 Caenorhabditis elegans
Exon10174   57   I: 4534742-4534798 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y119C1B.8a.1 4525970 4534798 -1

1 Sequence

Length
2987

1 Sequence Ontology Term

Identifier Name Description
transcript