WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y119C1B.8d.1 Sequence Name  Y119C1B.8d.1
Length (nt)  2972   Chromosome Location  I: 4525984-4534800
Chromosome . Primary Identifier  I Chromosome Location . Start  4525984
Chromosome Location . End  4534800 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y119C1B.8d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022473 bet-1 Y119C1B.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y119C1B.8d Y119C1B.8d 2559   I: 4526395-4526490

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y119C1B.8d.1 4525984 4534800 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10076   507   I: 4525984-4526490 Caenorhabditis elegans
Exon10081   45   I: 4526551-4526595 Caenorhabditis elegans
Exon10088   54   I: 4526650-4526703 Caenorhabditis elegans
Exon10097   146   I: 4527742-4527887 Caenorhabditis elegans
Exon10106   189   I: 4528953-4529141 Caenorhabditis elegans
Exon10112   132   I: 4529872-4530003 Caenorhabditis elegans
Exon10121   217   I: 4530060-4530276 Caenorhabditis elegans
Exon10129   186   I: 4530591-4530776 Caenorhabditis elegans
Exon10137   657   I: 4531353-4532009 Caenorhabditis elegans
Exon10145   189   I: 4532577-4532765 Caenorhabditis elegans
Exon10153   324   I: 4533542-4533865 Caenorhabditis elegans
Exon10161   96   I: 4533920-4534015 Caenorhabditis elegans
Exon10169   171   I: 4534487-4534657 Caenorhabditis elegans
Exon10178   59   I: 4534742-4534800 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y119C1B.8d.1 4525984 4534800 -1

1 Sequence

Length
2972

1 Sequence Ontology Term

Identifier Name Description
transcript