WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21E8.3.1 Sequence Name  T21E8.3.1
Length (nt)  3959   Chromosome Location  X: 10859301-10864422
Chromosome . Primary Identifier  X Chromosome Location . Start  10859301
Chromosome Location . End  10864422 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21E8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004002 pgp-8 T21E8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21E8.3 T21E8.3 3732   X: 10859510-10859580

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T21E8.3.1 10859301 10864422 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251072   280   X: 10859301-10859580 Caenorhabditis elegans
Exon251073   274   X: 10859628-10859901 Caenorhabditis elegans
Exon251074   204   X: 10860016-10860219 Caenorhabditis elegans
Exon251075   465   X: 10860274-10860738 Caenorhabditis elegans
Exon251076   129   X: 10860781-10860909 Caenorhabditis elegans
Exon251077   105   X: 10860959-10861063 Caenorhabditis elegans
Exon251078   363   X: 10861153-10861515 Caenorhabditis elegans
Exon251079   342   X: 10861561-10861902 Caenorhabditis elegans
Exon251080   90   X: 10861982-10862071 Caenorhabditis elegans
Exon251081   735   X: 10862115-10862849 Caenorhabditis elegans
Exon251083   172   X: 10862902-10863073 Caenorhabditis elegans
Exon251084   297   X: 10863124-10863420 Caenorhabditis elegans
Exon251085   134   X: 10863463-10863596 Caenorhabditis elegans
Exon251086   110   X: 10863645-10863754 Caenorhabditis elegans
Exon251087   157   X: 10863935-10864091 Caenorhabditis elegans
Exon251088   102   X: 10864321-10864422 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T21E8.3.1 10859301 10864422 -1

1 Sequence

Length
3959

1 Sequence Ontology Term

Identifier Name Description
transcript