WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21E8.2.1 Sequence Name  T21E8.2.1
Length (nt)  3459   Chromosome Location  X: 10865347-10870237
Chromosome . Primary Identifier  X Chromosome Location . Start  10865347
Chromosome Location . End  10870237 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21E8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004001 pgp-7 T21E8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21E8.2 T21E8.2 3459   X: 10865347-10865580

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T21E8.2.1 10865347 10870237 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251089   234   X: 10865347-10865580 Caenorhabditis elegans
Exon251090   465   X: 10865631-10866095 Caenorhabditis elegans
Exon251091   129   X: 10866147-10866275 Caenorhabditis elegans
Exon251092   105   X: 10866320-10866424 Caenorhabditis elegans
Exon251093   363   X: 10866609-10866971 Caenorhabditis elegans
Exon251094   284   X: 10867018-10867301 Caenorhabditis elegans
Exon251095   97   X: 10867352-10867448 Caenorhabditis elegans
Exon251096   90   X: 10867689-10867778 Caenorhabditis elegans
Exon251097   615   X: 10867823-10868437 Caenorhabditis elegans
Exon251098   114   X: 10868487-10868600 Caenorhabditis elegans
Exon251099   172   X: 10868644-10868815 Caenorhabditis elegans
Exon251100   297   X: 10869247-10869543 Caenorhabditis elegans
Exon251101   134   X: 10869597-10869730 Caenorhabditis elegans
Exon251102   110   X: 10869776-10869885 Caenorhabditis elegans
Exon251103   157   X: 10869936-10870092 Caenorhabditis elegans
Exon251104   93   X: 10870145-10870237 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T21E8.2.1 10865347 10870237 -1

1 Sequence

Length
3459

1 Sequence Ontology Term

Identifier Name Description
transcript