WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47B10.3.1 Sequence Name  F47B10.3.1
Length (nt)  1251   Chromosome Location  X: 10892190-10893677
Chromosome . Primary Identifier  X Chromosome Location . Start  10892190
Chromosome Location . End  10893677 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47B10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009814 F47B10.3 F47B10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47B10.3 F47B10.3 1143   X: 10892190-10892274

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47B10.3.1 10892190 10893677 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251179   85   X: 10892190-10892274 Caenorhabditis elegans
Exon251180   334   X: 10892332-10892665 Caenorhabditis elegans
Exon251181   124   X: 10892706-10892829 Caenorhabditis elegans
Exon251182   139   X: 10892874-10893012 Caenorhabditis elegans
Exon251183   106   X: 10893062-10893167 Caenorhabditis elegans
Exon251184   463   X: 10893215-10893677 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47B10.3.1 10892190 10893677 1

1 Sequence

Length
1251

1 Sequence Ontology Term

Identifier Name Description
transcript