WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47B10.2.1 Sequence Name  F47B10.2.1
Length (nt)  2429   Chromosome Location  X: 10893567-10896598
Chromosome . Primary Identifier  X Chromosome Location . Start  10893567
Chromosome Location . End  10896598 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47B10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009813 haly-1 F47B10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47B10.2 F47B10.2 2034   X: 10893689-10893911

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47B10.2.1 10893567 10896598 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251185   345   X: 10893567-10893911 Caenorhabditis elegans
Exon251186   179   X: 10893958-10894136 Caenorhabditis elegans
Exon251187   65   X: 10894183-10894247 Caenorhabditis elegans
Exon251188   372   X: 10894312-10894683 Caenorhabditis elegans
Exon251189   192   X: 10894737-10894928 Caenorhabditis elegans
Exon251190   240   X: 10894974-10895213 Caenorhabditis elegans
Exon251191   231   X: 10895258-10895488 Caenorhabditis elegans
Exon251192   200   X: 10895534-10895733 Caenorhabditis elegans
Exon251193   103   X: 10895779-10895881 Caenorhabditis elegans
Exon251194   157   X: 10895935-10896091 Caenorhabditis elegans
Exon251195   345   X: 10896254-10896598 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47B10.2.1 10893567 10896598 -1

1 Sequence

Length
2429

1 Sequence Ontology Term

Identifier Name Description
transcript