WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44E4.1a.1 Sequence Name  C44E4.1a.1
Length (nt)  12767   Chromosome Location  I: 4610143-4633347
Chromosome . Primary Identifier  I Chromosome Location . Start  4610143
Chromosome Location . End  4633347 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44E4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016650 ubr-4 C44E4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44E4.1a C44E4.1a 12642   I: 4610268-4610456

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44E4.1a.1 4610143 4633347 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10359   314   I: 4610143-4610456 Caenorhabditis elegans
Exon10361   307   I: 4610507-4610813 Caenorhabditis elegans
Exon10364   443   I: 4611271-4611713 Caenorhabditis elegans
Exon10368   997   I: 4612026-4613022 Caenorhabditis elegans
Exon10370   395   I: 4613279-4613673 Caenorhabditis elegans
Exon10373   135   I: 4613896-4614030 Caenorhabditis elegans
Exon10376   680   I: 4614072-4614751 Caenorhabditis elegans
Exon10379   476   I: 4614802-4615277 Caenorhabditis elegans
Exon10382   305   I: 4615837-4616141 Caenorhabditis elegans
Exon10385   1197   I: 4616803-4617999 Caenorhabditis elegans
Exon10388   407   I: 4618529-4618935 Caenorhabditis elegans
Exon10391   1571   I: 4619675-4621245 Caenorhabditis elegans
Exon10394   907   I: 4621867-4622773 Caenorhabditis elegans
Exon10397   963   I: 4623531-4624493 Caenorhabditis elegans
Exon10399   268   I: 4625612-4625879 Caenorhabditis elegans
Exon10403   742   I: 4626465-4627206 Caenorhabditis elegans
Exon10405   1445   I: 4628068-4629512 Caenorhabditis elegans
Exon10409   230   I: 4629946-4630175 Caenorhabditis elegans
Exon10413   350   I: 4631501-4631850 Caenorhabditis elegans
Exon10416   517   I: 4632596-4633112 Caenorhabditis elegans
Exon10419   118   I: 4633230-4633347 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44E4.1a.1 4610143 4633347 -1

1 Sequence

Length
12767

1 Sequence Ontology Term

Identifier Name Description
transcript