WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47B10.8a.1 Sequence Name  F47B10.8a.1
Length (nt)  2801   Chromosome Location  X: 10905183-10908463
Chromosome . Primary Identifier  X Chromosome Location . Start  10905183
Chromosome Location . End  10908463 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47B10.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009819 F47B10.8 F47B10.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47B10.8a F47B10.8a 714   X: 10905387-10905541

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47B10.8a.1 10905183 10908463 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251210   359   X: 10905183-10905541 Caenorhabditis elegans
Exon251213   77   X: 10905592-10905668 Caenorhabditis elegans
Exon251217   80   X: 10905720-10905799 Caenorhabditis elegans
Exon251221   110   X: 10905854-10905963 Caenorhabditis elegans
Exon251225   94   X: 10906085-10906178 Caenorhabditis elegans
Exon251232   2081   X: 10906383-10908463 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47B10.8a.1 10905183 10908463 -1

1 Sequence

Length
2801

1 Sequence Ontology Term

Identifier Name Description
transcript