WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21B6.5.1 Sequence Name  T21B6.5.1
Length (nt)  954   Chromosome Location  X: 10916765-10919713
Chromosome . Primary Identifier  X Chromosome Location . Start  10916765
Chromosome Location . End  10919713 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21B6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011882 nstp-9 T21B6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21B6.5 T21B6.5 954   X: 10916765-10916864

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21B6.5.1 10916765 10919713 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251242   100   X: 10916765-10916864 Caenorhabditis elegans
Exon251243   101   X: 10917358-10917458 Caenorhabditis elegans
Exon251244   208   X: 10918062-10918269 Caenorhabditis elegans
Exon251245   185   X: 10918433-10918617 Caenorhabditis elegans
Exon251246   117   X: 10918664-10918780 Caenorhabditis elegans
Exon251247   141   X: 10919372-10919512 Caenorhabditis elegans
Exon251248   61   X: 10919565-10919625 Caenorhabditis elegans
Exon251249   41   X: 10919673-10919713 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21B6.5.1 10916765 10919713 -1

1 Sequence

Length
954

1 Sequence Ontology Term

Identifier Name Description
transcript