WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00202167 Gene Name  T21B6.17
Sequence Name  ? T21B6.17 Organism  Caenorhabditis elegans
Automated Description  Is affected by ilc-17.1 based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 341
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00202167

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T21B6.17 T21B6.17 341   X: 10937569-10937909
 

Other

0 CDSs

0 RNAi Result

16 Allele

Public Name
gk964260
gk964029
gk962707
gk964028
gk963810
WBVar01602162
WBVar01987677
WBVar01832014
tm10157
WBVar01889178
WBVar01889179
gk576358
gk378437
gk719482
WBVar00064804
otn4658

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00202167 10937569 10937909 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_10937910..10938193   284 X: 10937910-10938193 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in ilc-17.1(syb5296) comparing to in N2 animals at L4 larva stage. DESeq2, fold change > 2, FDR < 0.05. WBPaper00066594:ilc-17.1(syb5296)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00202167 10937569 10937909 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
341

1 Sequence Ontology Term