WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21B6.2.1 Sequence Name  T21B6.2.1
Length (nt)  1295   Chromosome Location  X: 10938194-10941355
Chromosome . Primary Identifier  X Chromosome Location . Start  10938194
Chromosome Location . End  10941355 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21B6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011879 pho-7 T21B6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21B6.2 T21B6.2 1146   X: 10938342-10938416

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21B6.2.1 10938194 10941355 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251273   223   X: 10938194-10938416 Caenorhabditis elegans
Exon251274   144   X: 10938467-10938610 Caenorhabditis elegans
Exon251275   111   X: 10939206-10939316 Caenorhabditis elegans
Exon251276   88   X: 10939361-10939448 Caenorhabditis elegans
Exon251277   134   X: 10939490-10939623 Caenorhabditis elegans
Exon251278   91   X: 10939677-10939767 Caenorhabditis elegans
Exon251279   89   X: 10940690-10940778 Caenorhabditis elegans
Exon251280   156   X: 10940826-10940981 Caenorhabditis elegans
Exon251281   87   X: 10941041-10941127 Caenorhabditis elegans
Exon251282   172   X: 10941184-10941355 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21B6.2.1 10938194 10941355 -1

1 Sequence

Length
1295

1 Sequence Ontology Term

Identifier Name Description
transcript