WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21B6.3.1 Sequence Name  T21B6.3.1
Length (nt)  2823   Chromosome Location  X: 10945160-10948952
Chromosome . Primary Identifier  X Chromosome Location . Start  10945160
Chromosome Location . End  10948952 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21B6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011880 T21B6.3 T21B6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21B6.3 T21B6.3 2466   X: 10945467-10945572

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21B6.3.1 10945160 10948952 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251283   413   X: 10945160-10945572 Caenorhabditis elegans
Exon251284   57   X: 10945627-10945683 Caenorhabditis elegans
Exon251285   131   X: 10945733-10945863 Caenorhabditis elegans
Exon251286   1718   X: 10945913-10947630 Caenorhabditis elegans
Exon251287   228   X: 10947678-10947905 Caenorhabditis elegans
Exon251288   87   X: 10948158-10948244 Caenorhabditis elegans
Exon251290   81   X: 10948589-10948669 Caenorhabditis elegans
Exon251291   108   X: 10948845-10948952 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21B6.3.1 10945160 10948952 -1

1 Sequence

Length
2823

1 Sequence Ontology Term

Identifier Name Description
transcript