WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09C8.1.1 Sequence Name  K09C8.1.1
Length (nt)  2526   Chromosome Location  X: 10954134-10958233
Chromosome . Primary Identifier  X Chromosome Location . Start  10954134
Chromosome Location . End  10958233 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09C8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003943 pbo-4 K09C8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09C8.1 K09C8.1 2352   X: 10954134-10954315

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09C8.1.1 10954134 10958233 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251295   182   X: 10954134-10954315 Caenorhabditis elegans
Exon251296   185   X: 10954365-10954549 Caenorhabditis elegans
Exon251297   88   X: 10954935-10955022 Caenorhabditis elegans
Exon251298   157   X: 10955068-10955224 Caenorhabditis elegans
Exon251299   285   X: 10955268-10955552 Caenorhabditis elegans
Exon251300   112   X: 10955602-10955713 Caenorhabditis elegans
Exon251301   178   X: 10955766-10955943 Caenorhabditis elegans
Exon251302   214   X: 10955989-10956202 Caenorhabditis elegans
Exon251303   126   X: 10956248-10956373 Caenorhabditis elegans
Exon251304   156   X: 10956419-10956574 Caenorhabditis elegans
Exon251305   119   X: 10956622-10956740 Caenorhabditis elegans
Exon251306   229   X: 10956853-10957081 Caenorhabditis elegans
Exon251307   92   X: 10957136-10957227 Caenorhabditis elegans
Exon251308   125   X: 10957282-10957406 Caenorhabditis elegans
Exon251309   278   X: 10957956-10958233 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09C8.1.1 10954134 10958233 1

1 Sequence

Length
2526

1 Sequence Ontology Term

Identifier Name Description
transcript