WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09C8.4.1 Sequence Name  K09C8.4.1
Length (nt)  2024   Chromosome Location  X: 10966551-10969901
Chromosome . Primary Identifier  X Chromosome Location . Start  10966551
Chromosome Location . End  10969901 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09C8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010716 lge-1 K09C8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09C8.4 K09C8.4 1896   X: 10966558-10966612

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09C8.4.1 10966551 10969901 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251331   62   X: 10966551-10966612 Caenorhabditis elegans
Exon251332   62   X: 10966661-10966722 Caenorhabditis elegans
Exon251333   309   X: 10966787-10967095 Caenorhabditis elegans
Exon251334   159   X: 10967139-10967297 Caenorhabditis elegans
Exon251337   132   X: 10967912-10968043 Caenorhabditis elegans
Exon251338   450   X: 10968377-10968826 Caenorhabditis elegans
Exon251339   190   X: 10968872-10969061 Caenorhabditis elegans
Exon251340   155   X: 10969107-10969261 Caenorhabditis elegans
Exon251341   87   X: 10969308-10969394 Caenorhabditis elegans
Exon251342   128   X: 10969438-10969565 Caenorhabditis elegans
Exon251343   290   X: 10969612-10969901 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09C8.4.1 10966551 10969901 1

1 Sequence

Length
2024

1 Sequence Ontology Term

Identifier Name Description
transcript