WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59F3.5.2 Sequence Name  F59F3.5.2
Length (nt)  4083   Chromosome Location  X: 10982351-10988267
Chromosome . Primary Identifier  X Chromosome Location . Start  10982351
Chromosome Location . End  10988267 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59F3.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006897 ver-4 F59F3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59F3.5 F59F3.5 3651   X: 10982429-10982521

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59F3.5.2 10982351 10988267 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251370   8   X: 10982351-10982358 Caenorhabditis elegans
Exon251371   143   X: 10982379-10982521 Caenorhabditis elegans
Exon251374   82   X: 10982922-10983003 Caenorhabditis elegans
Exon251376   665   X: 10983673-10984337 Caenorhabditis elegans
Exon251378   533   X: 10984386-10984918 Caenorhabditis elegans
Exon251380   346   X: 10985023-10985368 Caenorhabditis elegans
Exon251382   269   X: 10985419-10985687 Caenorhabditis elegans
Exon251384   483   X: 10985833-10986315 Caenorhabditis elegans
Exon251386   254   X: 10986368-10986621 Caenorhabditis elegans
Exon251388   127   X: 10986666-10986792 Caenorhabditis elegans
Exon251390   259   X: 10986853-10987111 Caenorhabditis elegans
Exon251392   110   X: 10987159-10987268 Caenorhabditis elegans
Exon251394   228   X: 10987319-10987546 Caenorhabditis elegans
Exon251396   106   X: 10987648-10987753 Caenorhabditis elegans
Exon251398   470   X: 10987798-10988267 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59F3.5.2 10982351 10988267 1

1 Sequence

Length
4083

1 Sequence Ontology Term

Identifier Name Description
transcript