WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59F3.2.1 Sequence Name  F59F3.2.1
Length (nt)  1470   Chromosome Location  X: 10999663-11001850
Chromosome . Primary Identifier  X Chromosome Location . Start  10999663
Chromosome Location . End  11001850 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59F3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000750 col-177 F59F3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59F3.2 F59F3.2 1293   X: 10999840-10999905

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59F3.2.1 10999663 11001850 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251447   243   X: 10999663-10999905 Caenorhabditis elegans
Exon251448   61   X: 10999977-11000037 Caenorhabditis elegans
Exon251449   88   X: 11000114-11000201 Caenorhabditis elegans
Exon251451   118   X: 11000425-11000542 Caenorhabditis elegans
Exon251452   71   X: 11000587-11000657 Caenorhabditis elegans
Exon251453   483   X: 11000699-11001181 Caenorhabditis elegans
Exon251454   81   X: 11001329-11001409 Caenorhabditis elegans
Exon251455   157   X: 11001473-11001629 Caenorhabditis elegans
Exon251456   168   X: 11001683-11001850 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59F3.2.1 10999663 11001850 -1

1 Sequence

Length
1470

1 Sequence Ontology Term

Identifier Name Description
transcript