WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.3.1 Sequence Name  F58A3.3.1
Length (nt)  1054   Chromosome Location  X: 11012637-11014526
Chromosome . Primary Identifier  X Chromosome Location . Start  11012637
Chromosome Location . End  11014526 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010223 F58A3.3 F58A3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.3 F58A3.3 915   X: 11012662-11012748

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.3.1 11012637 11014526 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251453   112   X: 11012637-11012748 Caenorhabditis elegans
Exon251454   153   X: 11012811-11012963 Caenorhabditis elegans
Exon251455   123   X: 11013014-11013136 Caenorhabditis elegans
Exon251456   107   X: 11013198-11013304 Caenorhabditis elegans
Exon251457   72   X: 11013362-11013433 Caenorhabditis elegans
Exon251458   196   X: 11013481-11013676 Caenorhabditis elegans
Exon251459   100   X: 11014193-11014292 Caenorhabditis elegans
Exon251460   191   X: 11014336-11014526 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.3.1 11012637 11014526 1

1 Sequence

Length
1054

1 Sequence Ontology Term

Identifier Name Description
transcript