WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.2h.1 Sequence Name  F58A3.2h.1
Length (nt)  3775   Chromosome Location  X: 11016400-11023421
Chromosome . Primary Identifier  X Chromosome Location . Start  11016400
Chromosome Location . End  11023421 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.2h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2h F58A3.2h 3462   X: 11016441-11016528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2h.1 11016400 11023421 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251462   129   X: 11016400-11016528 Caenorhabditis elegans
Exon251483   62   X: 11016582-11016643 Caenorhabditis elegans
Exon251496   162   X: 11016691-11016852 Caenorhabditis elegans
Exon251509   70   X: 11017436-11017505 Caenorhabditis elegans
Exon251521   351   X: 11017580-11017930 Caenorhabditis elegans
Exon251535   236   X: 11018215-11018450 Caenorhabditis elegans
Exon251548   240   X: 11018525-11018764 Caenorhabditis elegans
Exon251561   162   X: 11018813-11018974 Caenorhabditis elegans
Exon251574   108   X: 11019021-11019128 Caenorhabditis elegans
Exon251587   437   X: 11019178-11019614 Caenorhabditis elegans
Exon251600   79   X: 11019683-11019761 Caenorhabditis elegans
Exon251613   294   X: 11019817-11020110 Caenorhabditis elegans
Exon251626   197   X: 11020287-11020483 Caenorhabditis elegans
Exon251639   84   X: 11020534-11020617 Caenorhabditis elegans
Exon251652   105   X: 11021150-11021254 Caenorhabditis elegans
Exon251665   163   X: 11021309-11021471 Caenorhabditis elegans
Exon251678   114   X: 11021517-11021630 Caenorhabditis elegans
Exon251684   127   X: 11021723-11021849 Caenorhabditis elegans
Exon251698   165   X: 11021904-11022068 Caenorhabditis elegans
Exon251712   82   X: 11022380-11022461 Caenorhabditis elegans
Exon251720   93   X: 11022953-11023045 Caenorhabditis elegans
Exon251730   315   X: 11023107-11023421 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2h.1 11016400 11023421 1

1 Sequence

Length
3775

1 Sequence Ontology Term

Identifier Name Description
transcript