WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.2a.1 Sequence Name  F58A3.2a.1
Length (nt)  3895   Chromosome Location  X: 11016410-11023421
Chromosome . Primary Identifier  X Chromosome Location . Start  11016410
Chromosome Location . End  11023421 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2a F58A3.2a 3123   X: 11016441-11016528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2a.1 11016410 11023421 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251470   119   X: 11016410-11016528 Caenorhabditis elegans
Exon251474   62   X: 11016582-11016643 Caenorhabditis elegans
Exon251487   162   X: 11016691-11016852 Caenorhabditis elegans
Exon251500   70   X: 11017436-11017505 Caenorhabditis elegans
Exon251513   351   X: 11017580-11017930 Caenorhabditis elegans
Exon251526   236   X: 11018215-11018450 Caenorhabditis elegans
Exon251539   240   X: 11018525-11018764 Caenorhabditis elegans
Exon251552   162   X: 11018813-11018974 Caenorhabditis elegans
Exon251565   108   X: 11019021-11019128 Caenorhabditis elegans
Exon251578   437   X: 11019178-11019614 Caenorhabditis elegans
Exon251591   79   X: 11019683-11019761 Caenorhabditis elegans
Exon251604   294   X: 11019817-11020110 Caenorhabditis elegans
Exon251617   197   X: 11020287-11020483 Caenorhabditis elegans
Exon251630   84   X: 11020534-11020617 Caenorhabditis elegans
Exon251643   105   X: 11021150-11021254 Caenorhabditis elegans
Exon251656   163   X: 11021309-11021471 Caenorhabditis elegans
Exon251669   114   X: 11021517-11021630 Caenorhabditis elegans
Exon251691   346   X: 11021723-11022068 Caenorhabditis elegans
Exon251702   76   X: 11022130-11022205 Caenorhabditis elegans
Exon251706   82   X: 11022380-11022461 Caenorhabditis elegans
Exon251714   93   X: 11022953-11023045 Caenorhabditis elegans
Exon251727   315   X: 11023107-11023421 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2a.1 11016410 11023421 1

1 Sequence

Length
3895

1 Sequence Ontology Term

Identifier Name Description
transcript