WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.2a.4 Sequence Name  F58A3.2a.4
Length (nt)  3958   Chromosome Location  X: 11016410-11023310
Chromosome . Primary Identifier  X Chromosome Location . Start  11016410
Chromosome Location . End  11023310 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.2a.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2a F58A3.2a 3123   X: 11016441-11016528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F58A3.2a.4 11016410 11023310 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251494   119   X: 11016410-11016528 Caenorhabditis elegans
Exon251504   62   X: 11016582-11016643 Caenorhabditis elegans
Exon251517   162   X: 11016691-11016852 Caenorhabditis elegans
Exon251530   70   X: 11017436-11017505 Caenorhabditis elegans
Exon251543   351   X: 11017580-11017930 Caenorhabditis elegans
Exon251556   236   X: 11018215-11018450 Caenorhabditis elegans
Exon251569   240   X: 11018525-11018764 Caenorhabditis elegans
Exon251582   162   X: 11018813-11018974 Caenorhabditis elegans
Exon251595   108   X: 11019021-11019128 Caenorhabditis elegans
Exon251608   437   X: 11019178-11019614 Caenorhabditis elegans
Exon251621   79   X: 11019683-11019761 Caenorhabditis elegans
Exon251634   294   X: 11019817-11020110 Caenorhabditis elegans
Exon251647   197   X: 11020287-11020483 Caenorhabditis elegans
Exon251660   84   X: 11020534-11020617 Caenorhabditis elegans
Exon251673   105   X: 11021150-11021254 Caenorhabditis elegans
Exon251686   163   X: 11021309-11021471 Caenorhabditis elegans
Exon251699   114   X: 11021517-11021630 Caenorhabditis elegans
Exon251719   346   X: 11021723-11022068 Caenorhabditis elegans
Exon251731   332   X: 11022130-11022461 Caenorhabditis elegans
Exon251743   93   X: 11022953-11023045 Caenorhabditis elegans
Exon251751   204   X: 11023107-11023310 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F58A3.2a.4 11016410 11023310 1

1 Sequence

Length
3958

1 Sequence Ontology Term

Identifier Name Description
transcript