WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.2a.3 Sequence Name  F58A3.2a.3
Length (nt)  3659   Chromosome Location  X: 11016410-11023386
Chromosome . Primary Identifier  X Chromosome Location . Start  11016410
Chromosome Location . End  11023386 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.2a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2a F58A3.2a 3123   X: 11016441-11016528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2a.3 11016410 11023386 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251495   119   X: 11016410-11016528 Caenorhabditis elegans
Exon251503   62   X: 11016582-11016643 Caenorhabditis elegans
Exon251516   162   X: 11016691-11016852 Caenorhabditis elegans
Exon251529   70   X: 11017436-11017505 Caenorhabditis elegans
Exon251542   351   X: 11017580-11017930 Caenorhabditis elegans
Exon251555   236   X: 11018215-11018450 Caenorhabditis elegans
Exon251568   240   X: 11018525-11018764 Caenorhabditis elegans
Exon251581   162   X: 11018813-11018974 Caenorhabditis elegans
Exon251594   108   X: 11019021-11019128 Caenorhabditis elegans
Exon251607   437   X: 11019178-11019614 Caenorhabditis elegans
Exon251620   79   X: 11019683-11019761 Caenorhabditis elegans
Exon251633   294   X: 11019817-11020110 Caenorhabditis elegans
Exon251646   197   X: 11020287-11020483 Caenorhabditis elegans
Exon251659   84   X: 11020534-11020617 Caenorhabditis elegans
Exon251672   105   X: 11021150-11021254 Caenorhabditis elegans
Exon251685   163   X: 11021309-11021471 Caenorhabditis elegans
Exon251698   114   X: 11021517-11021630 Caenorhabditis elegans
Exon251716   221   X: 11021723-11021943 Caenorhabditis elegans
Exon251734   82   X: 11022380-11022461 Caenorhabditis elegans
Exon251742   93   X: 11022953-11023045 Caenorhabditis elegans
Exon251752   280   X: 11023107-11023386 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2a.3 11016410 11023386 1

1 Sequence

Length
3659

1 Sequence Ontology Term

Identifier Name Description
transcript