WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.2l.1 Sequence Name  F58A3.2l.1
Length (nt)  3120   Chromosome Location  X: 11016441-11022161
Chromosome . Primary Identifier  X Chromosome Location . Start  11016441
Chromosome Location . End  11022161 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.2l.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2l F58A3.2l 3120   X: 11016441-11016528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2l.1 11016441 11022161 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251472   88   X: 11016441-11016528 Caenorhabditis elegans
Exon251484   62   X: 11016582-11016643 Caenorhabditis elegans
Exon251497   162   X: 11016691-11016852 Caenorhabditis elegans
Exon251510   70   X: 11017436-11017505 Caenorhabditis elegans
Exon251523   195   X: 11017945-11018139 Caenorhabditis elegans
Exon251536   236   X: 11018215-11018450 Caenorhabditis elegans
Exon251549   240   X: 11018525-11018764 Caenorhabditis elegans
Exon251562   162   X: 11018813-11018974 Caenorhabditis elegans
Exon251575   108   X: 11019021-11019128 Caenorhabditis elegans
Exon251588   437   X: 11019178-11019614 Caenorhabditis elegans
Exon251601   79   X: 11019683-11019761 Caenorhabditis elegans
Exon251614   294   X: 11019817-11020110 Caenorhabditis elegans
Exon251627   197   X: 11020287-11020483 Caenorhabditis elegans
Exon251640   84   X: 11020534-11020617 Caenorhabditis elegans
Exon251653   105   X: 11021150-11021254 Caenorhabditis elegans
Exon251666   163   X: 11021309-11021471 Caenorhabditis elegans
Exon251679   114   X: 11021517-11021630 Caenorhabditis elegans
Exon251685   127   X: 11021723-11021849 Caenorhabditis elegans
Exon251699   165   X: 11021904-11022068 Caenorhabditis elegans
Exon251701   32   X: 11022130-11022161 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2l.1 11016441 11022161 1

1 Sequence

Length
3120

1 Sequence Ontology Term

Identifier Name Description
transcript