WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.2n.1 Sequence Name  F58A3.2n.1
Length (nt)  2985   Chromosome Location  X: 11016441-11022401
Chromosome . Primary Identifier  X Chromosome Location . Start  11016441
Chromosome Location . End  11022401 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.2n.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2n F58A3.2n 2985   X: 11016441-11016528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2n.1 11016441 11022401 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251500   88   X: 11016441-11016528 Caenorhabditis elegans
Exon251512   62   X: 11016582-11016643 Caenorhabditis elegans
Exon251525   162   X: 11016691-11016852 Caenorhabditis elegans
Exon251538   70   X: 11017436-11017505 Caenorhabditis elegans
Exon251551   195   X: 11017945-11018139 Caenorhabditis elegans
Exon251564   236   X: 11018215-11018450 Caenorhabditis elegans
Exon251577   240   X: 11018525-11018764 Caenorhabditis elegans
Exon251590   162   X: 11018813-11018974 Caenorhabditis elegans
Exon251603   108   X: 11019021-11019128 Caenorhabditis elegans
Exon251616   437   X: 11019178-11019614 Caenorhabditis elegans
Exon251629   79   X: 11019683-11019761 Caenorhabditis elegans
Exon251642   294   X: 11019817-11020110 Caenorhabditis elegans
Exon251655   197   X: 11020287-11020483 Caenorhabditis elegans
Exon251668   84   X: 11020534-11020617 Caenorhabditis elegans
Exon251681   105   X: 11021150-11021254 Caenorhabditis elegans
Exon251694   163   X: 11021309-11021471 Caenorhabditis elegans
Exon251707   114   X: 11021517-11021630 Caenorhabditis elegans
Exon251713   127   X: 11021723-11021849 Caenorhabditis elegans
Exon251723   40   X: 11021904-11021943 Caenorhabditis elegans
Exon251732   22   X: 11022380-11022401 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2n.1 11016441 11022401 1

1 Sequence

Length
2985

1 Sequence Ontology Term

Identifier Name Description
transcript