WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.1b.1 Sequence Name  F58A3.1b.1
Length (nt)  2423   Chromosome Location  X: 11028947-11040612
Chromosome . Primary Identifier  X Chromosome Location . Start  11028947
Chromosome Location . End  11040612 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002261 ldb-1 F58A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.1b F58A3.1b 1737   X: 11029715-11029803

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.1b.1 11028947 11040612 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251733   94   X: 11028947-11029040 Caenorhabditis elegans
Exon251736   105   X: 11029699-11029803 Caenorhabditis elegans
Exon251742   109   X: 11037410-11037518 Caenorhabditis elegans
Exon251747   124   X: 11037593-11037716 Caenorhabditis elegans
Exon251752   305   X: 11037765-11038069 Caenorhabditis elegans
Exon251757   141   X: 11038153-11038293 Caenorhabditis elegans
Exon251762   85   X: 11038622-11038706 Caenorhabditis elegans
Exon251767   215   X: 11038755-11038969 Caenorhabditis elegans
Exon251772   675   X: 11039292-11039966 Caenorhabditis elegans
Exon251777   570   X: 11040043-11040612 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.1b.1 11028947 11040612 1

1 Sequence

Length
2423

1 Sequence Ontology Term

Identifier Name Description
transcript