WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09F12.2.1 Sequence Name  C09F12.2.1
Length (nt)  2063   Chromosome Location  X: 11053915-11056979
Chromosome . Primary Identifier  X Chromosome Location . Start  11053915
Chromosome Location . End  11056979 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09F12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007482 C09F12.2 C09F12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09F12.2 C09F12.2 1815   X: 11053983-11054066

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09F12.2.1 11053915 11056979 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251825   152   X: 11053915-11054066 Caenorhabditis elegans
Exon251826   140   X: 11054158-11054297 Caenorhabditis elegans
Exon251827   130   X: 11054503-11054632 Caenorhabditis elegans
Exon251828   132   X: 11054939-11055070 Caenorhabditis elegans
Exon251829   171   X: 11055119-11055289 Caenorhabditis elegans
Exon251830   91   X: 11055341-11055431 Caenorhabditis elegans
Exon251831   492   X: 11055483-11055974 Caenorhabditis elegans
Exon251832   206   X: 11056064-11056269 Caenorhabditis elegans
Exon251833   150   X: 11056323-11056472 Caenorhabditis elegans
Exon251834   117   X: 11056527-11056643 Caenorhabditis elegans
Exon251835   282   X: 11056698-11056979 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09F12.2.1 11053915 11056979 1

1 Sequence

Length
2063

1 Sequence Ontology Term

Identifier Name Description
transcript