WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W04G3.3.1 Sequence Name  W04G3.3.1
Length (nt)  1396   Chromosome Location  X: 11065126-11066811
Chromosome . Primary Identifier  X Chromosome Location . Start  11065126
Chromosome Location . End  11066811 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04G3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012257 lpr-4 W04G3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W04G3.3 W04G3.3 1083   X: 11065188-11065301

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W04G3.3.1 11065126 11066811 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251862   176   X: 11065126-11065301 Caenorhabditis elegans
Exon251863   138   X: 11065350-11065487 Caenorhabditis elegans
Exon251864   406   X: 11065562-11065967 Caenorhabditis elegans
Exon251865   168   X: 11066040-11066207 Caenorhabditis elegans
Exon251866   159   X: 11066256-11066414 Caenorhabditis elegans
Exon251867   349   X: 11066463-11066811 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W04G3.3.1 11065126 11066811 1

1 Sequence

Length
1396

1 Sequence Ontology Term

Identifier Name Description
transcript