WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W04G3.6d.1 Sequence Name  W04G3.6d.1
Length (nt)  2016   Chromosome Location  X: 11080678-11087474
Chromosome . Primary Identifier  X Chromosome Location . Start  11080678
Chromosome Location . End  11087474 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04G3.6d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012259 sulp-7 W04G3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W04G3.6d W04G3.6d 1749   X: 11080680-11080815

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W04G3.6d.1 11080678 11087474 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251875   138   X: 11080678-11080815 Caenorhabditis elegans
Exon251878   111   X: 11080862-11080972 Caenorhabditis elegans
Exon251880   158   X: 11081029-11081186 Caenorhabditis elegans
Exon251886   54   X: 11081242-11081295 Caenorhabditis elegans
Exon251890   111   X: 11081399-11081509 Caenorhabditis elegans
Exon251894   162   X: 11081560-11081721 Caenorhabditis elegans
Exon251897   83   X: 11081766-11081848 Caenorhabditis elegans
Exon251899   262   X: 11082108-11082369 Caenorhabditis elegans
Exon251903   78   X: 11083712-11083789 Caenorhabditis elegans
Exon251904   96   X: 11083842-11083937 Caenorhabditis elegans
Exon251905   107   X: 11083995-11084101 Caenorhabditis elegans
Exon251909   42   X: 11086678-11086719 Caenorhabditis elegans
Exon251910   166   X: 11086772-11086937 Caenorhabditis elegans
Exon251911   124   X: 11086983-11087106 Caenorhabditis elegans
Exon251912   324   X: 11087151-11087474 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W04G3.6d.1 11080678 11087474 1

1 Sequence

Length
2016

1 Sequence Ontology Term

Identifier Name Description
transcript