WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05C9.2.1 Sequence Name  C05C9.2.1
Length (nt)  776   Chromosome Location  X: 11153065-11157643
Chromosome . Primary Identifier  X Chromosome Location . Start  11153065
Chromosome Location . End  11157643 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05C9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007326 C05C9.2 C05C9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05C9.2 C05C9.2 675   X: 11153066-11153168

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05C9.2.1 11153065 11157643 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252026   104   X: 11153065-11153168 Caenorhabditis elegans
Exon252027   60   X: 11153218-11153277 Caenorhabditis elegans
Exon252028   56   X: 11153320-11153375 Caenorhabditis elegans
Exon252029   202   X: 11156877-11157078 Caenorhabditis elegans
Exon252030   52   X: 11157132-11157183 Caenorhabditis elegans
Exon252031   83   X: 11157228-11157310 Caenorhabditis elegans
Exon252032   36   X: 11157375-11157410 Caenorhabditis elegans
Exon252033   183   X: 11157461-11157643 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05C9.2.1 11153065 11157643 1

1 Sequence

Length
776

1 Sequence Ontology Term

Identifier Name Description
transcript