WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05C9.1.1 Sequence Name  C05C9.1.1
Length (nt)  1901   Chromosome Location  X: 11160837-11164006
Chromosome . Primary Identifier  X Chromosome Location . Start  11160837
Chromosome Location . End  11164006 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05C9.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007325 C05C9.1 C05C9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05C9.1 C05C9.1 1437   X: 11160981-11161019

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05C9.1.1 11160837 11164006 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252034   183   X: 11160837-11161019 Caenorhabditis elegans
Exon252035   114   X: 11161073-11161186 Caenorhabditis elegans
Exon252036   252   X: 11161422-11161673 Caenorhabditis elegans
Exon252037   72   X: 11161725-11161796 Caenorhabditis elegans
Exon252038   75   X: 11161846-11161920 Caenorhabditis elegans
Exon252039   232   X: 11161967-11162198 Caenorhabditis elegans
Exon252040   97   X: 11162248-11162344 Caenorhabditis elegans
Exon252041   184   X: 11162492-11162675 Caenorhabditis elegans
Exon252042   174   X: 11162720-11162893 Caenorhabditis elegans
Exon252046   518   X: 11163489-11164006 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05C9.1.1 11160837 11164006 1

1 Sequence

Length
1901

1 Sequence Ontology Term

Identifier Name Description
transcript