WormMine: Gene WBGene00197008

• WormBase Gene ID: WBGene00197008
• Gene Name: C05C9.7
• Sequence Name: C05C9.7
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by hmg-3 based on RNA-seq studies. Is affected by Tunicamycin based on microarray studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 103

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00197008

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:C05C9.7	C05C9.7	103	X: 11162908-11163010

Other

0 CDSs

0 RNAi Result

6 Allele

• gk964260
• gk964029
• gk962707
• gk964028
• gk963810
• WBVar01832016

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: WBGene00197008
• Start: 11162908
• End: 11163010
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in animals treated with 25ug per mL tunicamycin for 4 hours, comparing to control animals.	Fold-change > 1.5, ANOVA P values < 0.05.	WBPaper00055482:Tunicamycin_downregulated
	Transcripts that interact with HMG-3-HA in BAT1753 [hmg-3(bar24[hmg-3-3xHA]) I] at L4 larva stage.	N.A.	WBPaper00055013:HMG-3_interacting_transcript

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00197008
• Start: 11162908
• End: 11163010
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 103

1 Sequence Ontology Term