WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28B3.7a.1 Sequence Name  F28B3.7a.1
Length (nt)  4035   Chromosome Location  I: 4951571-4957667
Chromosome . Primary Identifier  I Chromosome Location . Start  4951571
Chromosome Location . End  4957667 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28B3.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001860 him-1 F28B3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28B3.7a F28B3.7a 3789   I: 4951810-4952031

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.7a.1 4951571 4957667 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11139   461   I: 4951571-4952031 Caenorhabditis elegans
Exon11142   324   I: 4952290-4952613 Caenorhabditis elegans
Exon11143   207   I: 4953311-4953517 Caenorhabditis elegans
Exon11144   122   I: 4953799-4953920 Caenorhabditis elegans
Exon11145   349   I: 4954056-4954404 Caenorhabditis elegans
Exon11146   282   I: 4954502-4954783 Caenorhabditis elegans
Exon11147   220   I: 4954971-4955190 Caenorhabditis elegans
Exon11148   350   I: 4955248-4955597 Caenorhabditis elegans
Exon11149   909   I: 4955650-4956558 Caenorhabditis elegans
Exon11150   582   I: 4956808-4957389 Caenorhabditis elegans
Exon11151   229   I: 4957439-4957667 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.7a.1 4951571 4957667 -1

1 Sequence

Length
4035

1 Sequence Ontology Term

Identifier Name Description
transcript